Media Summary: Countdown: 0:00 Git Tutorial: 5:00 This week I continue the introduction to Git, with a much greater focus on working with Github. In lesson we look at installing R packages from CRAN and Bioconductor, we discuss the Tidyverse and we see our first ... example.csv has moved - you can download it here: ...

29 Lockdown Learning Bioinformatics Along - Detailed Analysis & Overview

Countdown: 0:00 Git Tutorial: 5:00 This week I continue the introduction to Git, with a much greater focus on working with Github. In lesson we look at installing R packages from CRAN and Bioconductor, we discuss the Tidyverse and we see our first ... example.csv has moved - you can download it here: ... In lesson we take a look at the detail of the violin plot we created yesterday, and talk about the principles behind ggplot2 - the ... In lesson I give an overview of RNA-Seq for profiling and quantifying mRNA, and we install the SRA Toolkit for downloading ... Countdown: 0:00 Introduction: 5:17 BioMart Web Site: 15:09 BioMart in R: 23:47 Joining data: 1:00:23 In lesson we retrieve ...

Countdown: 0:00 Introduction: 5:00 In lesson I describe the content of a SAM (Sequence Alignment/Map) file, and we explore ... In lesson 13 we will edit the script we wrote in to run the muscle multiple sequence aligner which we installed with Conda in ...

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#29 Lockdown Learning Bioinformatics-along: tximport
#51 Lockdown Learning Bioinformatics-along: Introduction to Git II
#3 Lockdown Learning Bioinformatics-along: Working with files
#5 Lockdown Learning Bioinformatics-along: Recap and tips'n'tricks
#22 Lockdown Learning Bioinformatics-along: Beginning R, scalars, functions, data types and vectors
#25 Lockdown Learning Bioinformatics-along: R Package installation and Tidyverse
#6 Lockdown Learning Bioinformatics-along: Working with data I
#26 Lockdown Learning Bioinformatics-along: Grammar of Graphics
#15 Lockdown Learning Bioinformatics-along: Intro to RNA-Seq
#11 Lockdown Learning Bioinformatics-along: more scripting - for loops
#35 Lockdown Learning Bioinformatics-along: biomaRt
#45 Lockdown Learning Bioinformatics-along: SAM files and Bowtie2 options
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#29 Lockdown Learning Bioinformatics-along: tximport

#29 Lockdown Learning Bioinformatics-along: tximport

In lesson #

#51 Lockdown Learning Bioinformatics-along: Introduction to Git II

#51 Lockdown Learning Bioinformatics-along: Introduction to Git II

Countdown: 0:00 Git Tutorial: 5:00 This week I continue the introduction to Git, with a much greater focus on working with Github.

#3 Lockdown Learning Bioinformatics-along: Working with files

#3 Lockdown Learning Bioinformatics-along: Working with files

Walk through a practical introduction to

#5 Lockdown Learning Bioinformatics-along: Recap and tips'n'tricks

#5 Lockdown Learning Bioinformatics-along: Recap and tips'n'tricks

Walk through a practical introduction to

#22 Lockdown Learning Bioinformatics-along: Beginning R, scalars, functions, data types and vectors

#22 Lockdown Learning Bioinformatics-along: Beginning R, scalars, functions, data types and vectors

In lesson #22 we start to

#25 Lockdown Learning Bioinformatics-along: R Package installation and Tidyverse

#25 Lockdown Learning Bioinformatics-along: R Package installation and Tidyverse

In lesson #25 we look at installing R packages from CRAN and Bioconductor, we discuss the Tidyverse and we see our first ...

#6 Lockdown Learning Bioinformatics-along: Working with data I

#6 Lockdown Learning Bioinformatics-along: Working with data I

example.csv has moved - you can download it here: ...

#26 Lockdown Learning Bioinformatics-along: Grammar of Graphics

#26 Lockdown Learning Bioinformatics-along: Grammar of Graphics

In lesson #26 we take a look at the detail of the violin plot we created yesterday, and talk about the principles behind ggplot2 - the ...

#15 Lockdown Learning Bioinformatics-along: Intro to RNA-Seq

#15 Lockdown Learning Bioinformatics-along: Intro to RNA-Seq

In lesson #15 I give an overview of RNA-Seq for profiling and quantifying mRNA, and we install the SRA Toolkit for downloading ...

#11 Lockdown Learning Bioinformatics-along: more scripting - for loops

#11 Lockdown Learning Bioinformatics-along: more scripting - for loops

Walk through a practical introduction to

#35 Lockdown Learning Bioinformatics-along: biomaRt

#35 Lockdown Learning Bioinformatics-along: biomaRt

Countdown: 0:00 Introduction: 5:17 BioMart Web Site: 15:09 BioMart in R: 23:47 Joining data: 1:00:23 In lesson #35 we retrieve ...

#45 Lockdown Learning Bioinformatics-along: SAM files and Bowtie2 options

#45 Lockdown Learning Bioinformatics-along: SAM files and Bowtie2 options

Countdown: 0:00 Introduction: 5:00 In lesson #45 I describe the content of a SAM (Sequence Alignment/Map) file, and we explore ...

#13 Lockdown Learning Bioinformatics-along: Multiple Sequence Alignment

#13 Lockdown Learning Bioinformatics-along: Multiple Sequence Alignment

In lesson 13 we will edit the script we wrote in #11 to run the muscle multiple sequence aligner which we installed with Conda in ...