Media Summary: On April 28th, 2022, I was invited to give a talk about In this webinar, Ben Auch, Research Scientist, Innovation Lab, University of Minnesota Genomics Center, Cody Sheik, Assistant ... Rob Lalonde of Seqera Labs interviews Robert Petit, a senior bioinformatics scientist at Wyoming Public Health Laboratory. In this ...

Using Bactopia For The Complete - Detailed Analysis & Overview

On April 28th, 2022, I was invited to give a talk about In this webinar, Ben Auch, Research Scientist, Innovation Lab, University of Minnesota Genomics Center, Cody Sheik, Assistant ... Rob Lalonde of Seqera Labs interviews Robert Petit, a senior bioinformatics scientist at Wyoming Public Health Laboratory. In this ... Howdy everyone! Today I'm working through genome sequencing of a bacterial isolate that we found. The pipeline starts off ... Robert A. Petit III is giving an introduction to bactopia, a nextflow pipeline that is not part of nf-core but is using some ... Video recorded during the virtual Bioinfoskills for Microbial Genomics workshop - 02 Feb 2022.

In this video I provide a short overview of my poster presented at the SFA2F conference. This poster gives a preview for what you ... Demonstration of reviewing the results of the annotation from the service. In this webinar, Dan Browne and PacBio Bioinformatics Field Application Scientist, presents on microbial assembly as our latest ... Bioinformatics Users Group (BUG) Seminar February 8, 2021 North Carolina State University Jason M. Whitham FastANI and ... In this lecture, we explore Deciphering Bacterial Genomes: A Unified Workflow for Sample Preparation and Data Analysis, ...

Photo Gallery

Using Bactopia for the complete analysis of bacterial genomes
Complete Genomes within Reach: Closing Bacterial Genomes
Bactopia Overview - ABPHM 2025 Bioinformatics Showcase
Episode 7: Pathogens, Bactopia and awesome shirts
Bioinformatics - Assembling, Annotating, and QA for Bacterial Genomes!
Bactopia Overview - ABPHM Bioinformatics Showcase
bytesize: bactopia & using nf-core components in non-nf-core pipelines
08 Working with Nextflow DSL2 modules and Bactopia | Robert Petit
SFA2F  Poster - Bactopia v2: Highly scalable, portable and customizable bacterial genome analyses
Comprehensive Genome Analysis - Annotation results
Bioinformatics Lunch & Learn: Better Assemblies of Bacterial Genomes with Microbial Analysis
BUG: FastANI and Mash for Rapid Whole Genome Comparison
View Detailed Profile
Using Bactopia for the complete analysis of bacterial genomes

Using Bactopia for the complete analysis of bacterial genomes

On April 28th, 2022, I was invited to give a talk about

Complete Genomes within Reach: Closing Bacterial Genomes

Complete Genomes within Reach: Closing Bacterial Genomes

In this webinar, Ben Auch, Research Scientist, Innovation Lab, University of Minnesota Genomics Center, Cody Sheik, Assistant ...

Bactopia Overview - ABPHM 2025 Bioinformatics Showcase

Bactopia Overview - ABPHM 2025 Bioinformatics Showcase

An overview of

Episode 7: Pathogens, Bactopia and awesome shirts

Episode 7: Pathogens, Bactopia and awesome shirts

Rob Lalonde of Seqera Labs interviews Robert Petit, a senior bioinformatics scientist at Wyoming Public Health Laboratory. In this ...

Bioinformatics - Assembling, Annotating, and QA for Bacterial Genomes!

Bioinformatics - Assembling, Annotating, and QA for Bacterial Genomes!

Howdy everyone! Today I'm working through genome sequencing of a bacterial isolate that we found. The pipeline starts off ...

Bactopia Overview - ABPHM Bioinformatics Showcase

Bactopia Overview - ABPHM Bioinformatics Showcase

This is a brief 1 minute overview of

bytesize: bactopia & using nf-core components in non-nf-core pipelines

bytesize: bactopia & using nf-core components in non-nf-core pipelines

Robert A. Petit III is giving an introduction to bactopia, a nextflow pipeline that is not part of nf-core but is using some ...

08 Working with Nextflow DSL2 modules and Bactopia | Robert Petit

08 Working with Nextflow DSL2 modules and Bactopia | Robert Petit

Video recorded during the virtual Bioinfoskills for Microbial Genomics workshop - 02 Feb 2022.

SFA2F  Poster - Bactopia v2: Highly scalable, portable and customizable bacterial genome analyses

SFA2F Poster - Bactopia v2: Highly scalable, portable and customizable bacterial genome analyses

In this video I provide a short overview of my poster presented at the SFA2F conference. This poster gives a preview for what you ...

Comprehensive Genome Analysis - Annotation results

Comprehensive Genome Analysis - Annotation results

Demonstration of reviewing the results of the annotation from the service.

Bioinformatics Lunch & Learn: Better Assemblies of Bacterial Genomes with Microbial Analysis

Bioinformatics Lunch & Learn: Better Assemblies of Bacterial Genomes with Microbial Analysis

In this webinar, Dan Browne and PacBio Bioinformatics Field Application Scientist, presents on microbial assembly as our latest ...

BUG: FastANI and Mash for Rapid Whole Genome Comparison

BUG: FastANI and Mash for Rapid Whole Genome Comparison

Bioinformatics Users Group (BUG) Seminar February 8, 2021 North Carolina State University Jason M. Whitham FastANI and ...

Deciphering Bacterial Genomes: A Unified Workflow for Sample Prep and Data Analysis

Deciphering Bacterial Genomes: A Unified Workflow for Sample Prep and Data Analysis

In this lecture, we explore Deciphering Bacterial Genomes: A Unified Workflow for Sample Preparation and Data Analysis, ...